Benjamin Stocker

Benjamin Stocker

Group leader, Prof.

Geocomputation and Earth Observation, Institute of Geography, University of Bern

Hi there

This is my research group’s website. Here, you can learn about who we are and about our research. And you can explore our open access code and our freely accessible learning materials (see Menu - Tutorials).

As a group, we are a collection of climate, ecosystem, and data scientists with a special interest in interactions between global environmental change and terrestrial ecology and biogeochemistry.

Our work yields insights into climate change impacts on land ecosystems and provides data-informed predictions of how forests and grasslands respond to a climatic extreme events, rising CO2 and changes in nutrient cycles. We use Earth observation data and develop process-based models that are founded on eco-evolutionary optimality principles to explain plant traits and their adaptation and acclimation to the environment. In more data-driven approaches, we apply machine learning and data assimilation techniques using diverse ecological data (ecosystem flux measurements, forest inventories, remote sensing, and manipulation experimental data, etc.). In brief, we build models, as simple as possible and as complex as necessary to learn the most.

We are motivated to gain a better understanding of issues that are becoming increasingly pressing to society and policy and that are key to creating a sustainable future.

Interests
  • Climate-biosphere interactions
  • Forecasting drought impacts
  • Monitoring the carbon cycle from space
  • Developing next-generation vegetation models
  • Model-data integration and machine-learning

Our home:

Projects

Overview of some past and ongoing research.

Featured Publications

Global Photosynthesis Acclimates to Rising Temperatures Through Predictable Changes in Photosynthetic Capacities, Enzyme Kinetics, and Stomatal Sensitivity

Thermal acclimation of photosynthesis, the physiological adjustment to temperature over weeks, may help plants mitigate adverse impacts of global warming, but is often under-represented in Earth System Models (ESMs). We evaluated a plant functional type (PFT)-agnostic, optimality-based model of C3ds photosynthesis with a global data set of leaf gas exchange measurements. We investigated how three key photosynthesis traits vary along a gradient of growing-season temperatures Tgrowth: optimal photosynthesis temperature Topt , net photosynthesis rate at Topt Aopt, and the width of the temperature response curve Tspan . We analyzed how each trait is influenced by three acclimation processes: acclimation of photosynthetic capacities (carboxylation, electron transport, and respiration), their enzymatic responses, and stomatal sensitivity to vapor pressure deficit. The inclusion of all three acclimation processes was essential for reproducing observed patterns: a linear increase in Topt with Tgrowth, and no correlations of Aopt and Tspan with Tgrowth. Acclimation of enzymatic responses and stomatal sensitivity was crucial for accurately predicting Topt and Tspan. Acclimation of the photosynthetic capacities was necessary to avoid a bias in Aopt that can arise when relying on static, PFT-specific parameters. Comparing a model with all and a model without any acclimation processes showed that thermal acclimation buffers the response of photosynthesis to warming substantially, leading to smaller increases in photosynthesis in cold climates (+2% instead of +18%) and smaller declines in warm climates (−4% instead of −22%). Our observations-constrained photosynthesis predictions suggest an important role of thermal acclimation in ESM, partly mitigating adverse effects of a warming climate.

Empirical evidence and theoretical understanding of ecosystem carbon and nitrogen cycle interactions

Summary Interactions between carbon (C) and nitrogen (N) cycles in terrestrial ecosystems are simulated in advanced vegetation models, yet methodologies vary widely, leading to divergent simulations of past land C balance trends. This underscores the need to reassess our understanding of ecosystem processes, given recent theoretical advancements and empirical data. We review current knowledge, emphasising evidence from experiments and trait data compilations for vegetation responses to CO2 and N input, alongside theoretical and ecological principles for modelling. N fertilisation increases leaf N content but inconsistently enhances leaf-level photosynthetic capacity. Whole-plant responses include increased leaf area and biomass, with reduced root allocation and increased aboveground biomass. Elevated atmospheric CO2 also boosts leaf area and biomass but intensifies belowground allocation, depleting soil N and likely reducing N losses. Global leaf traits data confirm these findings, indicating that soil N availability influences leaf N content more than photosynthetic capacity. A demonstration model based on the functional balance hypothesis accurately predicts responses to N and CO2 fertilisation on tissue allocation, growth and biomass, offering a path to reduce uncertainty in global C cycle projections.

Global patterns of water storage in the rooting zones of vegetation

The rooting-zone water-storage capacity—the amount of water accessible to plants—controls the sensitivity of land–atmosphere exchange of water and carbon during dry periods. How the rooting-zone water-storage capacity varies spatially is largely unknown and not directly observable. Here we estimate rooting-zone water-storage capacity globally from the relationship between remotely sensed vegetation activity, measured by combining evapotranspiration, sun-induced fluorescence and radiation estimates, and the cumulative water deficit calculated from daily time series of precipitation and evapotranspiration. Our findings indicate plant-available water stores that exceed the storage capacity of 2-m-deep soils across 37% of Earth’s vegetated surface. We find that biome-level variations of rooting-zone water-storage capacities correlate with observed rooting-zone depth distributions and reflect the influence of hydroclimate, as measured by the magnitude of annual cumulative water-deficit extremes. Smaller-scale variations are linked to topography and land use. Our findings document large spatial variations in the effective root-zone water-storage capacity and illustrate a tight link among the climatology of water deficits, rooting depth of vegetation and its sensitivity to water stress.

Recent Posts

Highlights of 2024
Here are some highlights of our research and collaborations in 2024. Research How does nitrogen influence the global carbon cycle? Nitrogen is an essential nutrient for plants and is used both in photosynthesis enzymes and for building cell structures.
Make geospatial data with a time dimension into a tidy format
The problem Geospatial data often has a time dimension. Such temporal geospatial data often comes in the form of multiple files that contain the data of a single time step - in the form of a geospatial map - or in the form of files that each contain the data of a subset of the time steps.
Global N uptake
Having good estimates for the global total annual nitrogen (N) uptake by plants is important because it tells us how much N is cycling in terrestrial ecosystems. We want to know this for example for putting the human perturbation of the global N cycle into context or as a target for models of the global carbon and nitrogen cycles.